VOGDB release 236

Release date
Release ID
236
Data source
NCBI Refseq release 236
Number of genomes
15791
Number of proteins
724147
VOGDB group
Number of VFAM: 40080 (Virus protein families)
Number of VOG: 49116 (Virus orthologous groups)
Number of VFOLD: 33327 (Virus protein structural folds)
Base URL
VOGDB release 236
VOGDB File
vog.raw_algs.alistat.txt (Statistics of multiple alignments): 3,306,620 bytes, MD5 checksum 8d661024de71d8b556c5de3168a7e6c2 https://fileshare.csb.univie.ac.at/vog/vog236/vog.raw_algs.alistat.txt
vog.annotations.tsv.gz (Funcational annotations of groups): 374,556 bytes, MD5 checksum 30b42e52252552bbf138f171d39fb122 https://fileshare.csb.univie.ac.at/vog/vog236/vog.annotations.tsv.gz
vfam.members.tsv.gz (Member protein ids of groups): 4,580,149 bytes, MD5 checksum 935b5f768b615b8365aa70ecd9a5c86c https://fileshare.csb.univie.ac.at/vog/vog236/vfam.members.tsv.gz
vfam.virusonly.tsv.gz (Specificity if groups to Viruses): 105,937 bytes, MD5 checksum 8a777299696e8ba1d20d454e3611fbc7 https://fileshare.csb.univie.ac.at/vog/vog236/vfam.virusonly.tsv.gz
vfam.lca.tsv.gz (Last common aencestors of groups): 505,954 bytes, MD5 checksum a0b54cc7220a353d18107017d82e15f3 https://fileshare.csb.univie.ac.at/vog/vog236/vfam.lca.tsv.gz
vog.hmm.tar.gz (Hidden Markov Models of groups): 580,452,971 bytes, MD5 checksum 4e17111ca1dc3a7529ef5dae26a642f6 https://fileshare.csb.univie.ac.at/vog/vog236/vog.hmm.tar.gz
vfam.annotations.tsv.gz (Funcational annotations of groups): 297,147 bytes, MD5 checksum e8b95279ecf9c7cbe8632cd289bf89eb https://fileshare.csb.univie.ac.at/vog/vog236/vfam.annotations.tsv.gz
vog.faa.tar.gz (Protein sequences of groups): 66,910,600 bytes, MD5 checksum e9a4566afaafb8067274d67a0c05f519 https://fileshare.csb.univie.ac.at/vog/vog236/vog.faa.tar.gz
vogdb.host.txt (Host information and classification for genomes): 487,967 bytes, MD5 checksum d3abb871cbff4ef611d352faaa3a7892 https://fileshare.csb.univie.ac.at/vog/vog236/vogdb.host.txt
vfold.faa.tar.gz (Protein sequences of groups): 64,791,369 bytes, MD5 checksum 9b324507cf06502c74dfd6e1dd334f64 https://fileshare.csb.univie.ac.at/vog/vog236/vfold.faa.tar.gz
vfam.raw_algs.tar.gz (Multiple sequence alignments of groups): 63,745,537 bytes, MD5 checksum e5e6056fd1e7cc76b50dd671dd5c44c8 https://fileshare.csb.univie.ac.at/vog/vog236/vfam.raw_algs.tar.gz
vog.members.tsv.gz (Member protein ids of groups): 4,666,375 bytes, MD5 checksum 928ae101116c543a0fde6649c12e08aa https://fileshare.csb.univie.ac.at/vog/vog236/vog.members.tsv.gz
vfold.members.tsv.gz (Member protein ids of groups): 4,541,056 bytes, MD5 checksum f84c3318c2e1a45fec2e912d7bdc5218 https://fileshare.csb.univie.ac.at/vog/vog236/vfold.members.tsv.gz
vfam.hmm.tar.gz (Hidden Markov Models of groups): 468,559,551 bytes, MD5 checksum 6d5c43b3bdcd465ac98e1a54fb7d84af https://fileshare.csb.univie.ac.at/vog/vog236/vfam.hmm.tar.gz
vfold.annotations.tsv.gz (Funcational annotations of groups): 244,554 bytes, MD5 checksum 15a947d9fa09527f389a69237a9b8789 https://fileshare.csb.univie.ac.at/vog/vog236/vfold.annotations.tsv.gz
vfam.representatives.colabfold_predictions.tar.gz (Protein structure predictions): 7,925,261,503 bytes, MD5 checksum 325ef2d0ebc52157cbef7dd826227494 https://fileshare.csb.univie.ac.at/vog/vog236/vfam.representatives.colabfold_predictions.tar.gz
vogdb.proteins.all.fa.gz (Protein sequences of all genomes): 107,411,905 bytes, MD5 checksum fd9b8461a358bece4ed7aea1c2a7be44 https://fileshare.csb.univie.ac.at/vog/vog236/vogdb.proteins.all.fa.gz
vogdb.genes.all.fa.gz (Gene sequences of all genomes): 172,872,866 bytes, MD5 checksum cf872ae19547faeb98296a39fec03b99 https://fileshare.csb.univie.ac.at/vog/vog236/vogdb.genes.all.fa.gz
vfam.raw_algs.alistat.txt (Statistics of multiple alignments): 2,742,146 bytes, MD5 checksum 661d7ae44c3a8c097afba2a86296b148 https://fileshare.csb.univie.ac.at/vog/vog236/vfam.raw_algs.alistat.txt
vfam.representatives.colabfold_mean_plddt.txt (Mean pLDDT values of protein structure predictions): 640,240 bytes, MD5 checksum 09cfdb728ff85fbbdbc72d37648f0cae https://fileshare.csb.univie.ac.at/vog/vog236/vfam.representatives.colabfold_mean_plddt.txt
vog.virusonly.tsv.gz (Specificity if groups to Viruses): 127,389 bytes, MD5 checksum 9e704afdd5c747d52b290241cf6a63a4 https://fileshare.csb.univie.ac.at/vog/vog236/vog.virusonly.tsv.gz
vog.raw_algs.tar.gz (Multiple sequence alignments of groups): 62,748,765 bytes, MD5 checksum 96bad38890073f2413ab9acd7c90ac86 https://fileshare.csb.univie.ac.at/vog/vog236/vog.raw_algs.tar.gz
vfold.lca.tsv.gz (Last common aencestors of groups): 418,338 bytes, MD5 checksum 5e964ff2dc1d9e50ceb6e8aa422bc69f https://fileshare.csb.univie.ac.at/vog/vog236/vfold.lca.tsv.gz
vogdb.functional_categories.txt (Lettercodes of functional categories): 308 bytes, MD5 checksum 6b816cc49c17d0095da91bad4e7552fa https://fileshare.csb.univie.ac.at/vog/vog236/vogdb.functional_categories.txt
vfold.virusonly.tsv.gz (Specificity if groups to Viruses): 87,287 bytes, MD5 checksum d09430d162f930b9aea65d626a976a14 https://fileshare.csb.univie.ac.at/vog/vog236/vfold.virusonly.tsv.gz
vog.lca.tsv.gz (Last common aencestors of groups): 625,089 bytes, MD5 checksum c467f8b28cf36ec0315d1063b6f8cfc0 https://fileshare.csb.univie.ac.at/vog/vog236/vog.lca.tsv.gz
vogdb.species.txt (Virus genomes used for VOG construction): 823,396 bytes, MD5 checksum 404cbfc03498ec5aef6f614a0a7990eb https://fileshare.csb.univie.ac.at/vog/vog236/vogdb.species.txt
vogdb.taxonomy.krona.html (Distribution of virus genome taxonomies): 7,046,195 bytes, MD5 checksum 0952976de71b5c0a7d6c0de482d16f74 https://fileshare.csb.univie.ac.at/vog/vog236/vogdb.taxonomy.krona.html
vfam.faa.tar.gz (Protein sequences of groups): 66,062,485 bytes, MD5 checksum d684fdf7ee19f837b96966b0b4f59cc4 https://fileshare.csb.univie.ac.at/vog/vog236/vfam.faa.tar.gz