VOGDB release 231

Release date
Release ID
231
Data source
NCBI Refseq release 231
Number of genomes
15019
Number of proteins
692869
VOGDB group
Number of VFAM: 39624 (Virus protein families)
Number of VFOLD: 33073 (Virus protein structural folds)
Number of VOG: 48445 (Virus orthologous groups)
Base URL
VOGDB release 231
VOGDB File
vfam.annotations.tsv.gz (Funcational annotations of groups): 285,209 bytes, MD5 checksum 14b86f1fdecf0020d4fe3e58e642729c https://fileshare.csb.univie.ac.at/vog/vog231/vfam.annotations.tsv.gz
vfam.faa.tar.gz (Protein sequences of groups): 62,814,659 bytes, MD5 checksum bb87fdc7336fd25394cdf5f8ae48569b https://fileshare.csb.univie.ac.at/vog/vog231/vfam.faa.tar.gz
vfam.hmm.tar.gz (Hidden Markov Models of groups): 458,770,010 bytes, MD5 checksum 20a0b53e33705ee99b1880c5d8bfa8c9 https://fileshare.csb.univie.ac.at/vog/vog231/vfam.hmm.tar.gz
vfam.lca.tsv.gz (Last common aencestors of groups): 440,289 bytes, MD5 checksum bb9637cb855483ae5e2f72fa0e431060 https://fileshare.csb.univie.ac.at/vog/vog231/vfam.lca.tsv.gz
vfam.members.tsv.gz (Member protein ids of groups): 4,274,455 bytes, MD5 checksum d12112fc08e1e825b8dc8e3905aa932f https://fileshare.csb.univie.ac.at/vog/vog231/vfam.members.tsv.gz
vfam.raw_algs.alistat.txt (Statistics of multiple alignments): 3,019,766 bytes, MD5 checksum fd6affa47fe288eabf8960b8b89e8315 https://fileshare.csb.univie.ac.at/vog/vog231/vfam.raw_algs.alistat.txt
vfam.raw_algs.tar.gz (Multiple sequence alignments of groups): 60,363,345 bytes, MD5 checksum 35c3686b5039509dd389ea341b7c900b https://fileshare.csb.univie.ac.at/vog/vog231/vfam.raw_algs.tar.gz
vfam.representatives.colabfold_mean_plddt.txt (Mean pLDDT values of protein structure predictions): 4,464 bytes, MD5 checksum 19180ee0e246dca42c19925c9056187b https://fileshare.csb.univie.ac.at/vog/vog231/vfam.representatives.colabfold_mean_plddt.txt
vfam.representatives.colabfold_predictions.tar.gz (Protein structure predictions): 2,126,108,097 bytes, MD5 checksum 146ccdd206866702611b2c5cd2935425 https://fileshare.csb.univie.ac.at/vog/vog231/vfam.representatives.colabfold_predictions.tar.gz
vfam.virusonly.tsv.gz (Specificity if groups to Viruses): 104,371 bytes, MD5 checksum ce489c1e37ac2b5d2d73935a57aae2cd https://fileshare.csb.univie.ac.at/vog/vog231/vfam.virusonly.tsv.gz
vfold.annotations.tsv.gz (Funcational annotations of groups): 238,815 bytes, MD5 checksum bc27d40a32da74afb2f9b04567075e06 https://fileshare.csb.univie.ac.at/vog/vog231/vfold.annotations.tsv.gz
vfold.faa.tar.gz (Protein sequences of groups): 61,610,425 bytes, MD5 checksum 61e92f71f2c43f7a82a7a6ea5b9f9e7f https://fileshare.csb.univie.ac.at/vog/vog231/vfold.faa.tar.gz
vfold.lca.tsv.gz (Last common aencestors of groups): 366,579 bytes, MD5 checksum 6e80c7eea702ba0de480386ddd730e12 https://fileshare.csb.univie.ac.at/vog/vog231/vfold.lca.tsv.gz
vfold.members.tsv.gz (Member protein ids of groups): 4,257,052 bytes, MD5 checksum 4088a8a5b5bf51dab9e9d6021f956cd5 https://fileshare.csb.univie.ac.at/vog/vog231/vfold.members.tsv.gz
vfold.virusonly.tsv.gz (Specificity if groups to Viruses): 86,217 bytes, MD5 checksum d663f282013dd7c6cf033ce3a88d2ca2 https://fileshare.csb.univie.ac.at/vog/vog231/vfold.virusonly.tsv.gz
vog.annotations.tsv.gz (Funcational annotations of groups): 365,718 bytes, MD5 checksum 59906fd4a9a762fa61ae38630c594179 https://fileshare.csb.univie.ac.at/vog/vog231/vog.annotations.tsv.gz
vogdb.functional_categories.txt (Lettercodes of functional categories): 264 bytes, MD5 checksum 91da9fb2ea00ce7ffb3248a072847a62 https://fileshare.csb.univie.ac.at/vog/vog231/vogdb.functional_categories.txt
vogdb.genes.all.fa.gz (Gene sequences of all genomes): 165,819,829 bytes, MD5 checksum 02a38eb461966ca9a4759a8998a467ef https://fileshare.csb.univie.ac.at/vog/vog231/vogdb.genes.all.fa.gz
vogdb.host.txt (Host information and classification for genomes): 477,720 bytes, MD5 checksum 404ad698f4b06b1363eedec16632a42c https://fileshare.csb.univie.ac.at/vog/vog231/vogdb.host.txt
vogdb.proteins.all.fa.gz (Protein sequences of all genomes): 103,020,524 bytes, MD5 checksum cb2c7184a79f996f14291fb54da07154 https://fileshare.csb.univie.ac.at/vog/vog231/vogdb.proteins.all.fa.gz
vogdb.species.txt (Virus genomes used for VOG construction): 780,590 bytes, MD5 checksum 790a3d899d775b1bbd1a5ff480f4266d https://fileshare.csb.univie.ac.at/vog/vog231/vogdb.species.txt
vogdb.taxonomy.krona.html (Distribution of virus genome taxonomies): 5,856,617 bytes, MD5 checksum 3b1f0d95e96e61f21d86b08d5f9d9003 https://fileshare.csb.univie.ac.at/vog/vog231/vogdb.taxonomy.krona.html
vog.faa.tar.gz (Protein sequences of groups): 63,725,685 bytes, MD5 checksum e3d224c48e7af5997f80106113f265e4 https://fileshare.csb.univie.ac.at/vog/vog231/vog.faa.tar.gz
vog.hmm.tar.gz (Hidden Markov Models of groups): 563,596,609 bytes, MD5 checksum a640847eaf39cd36d5a2174cf9f2dfd2 https://fileshare.csb.univie.ac.at/vog/vog231/vog.hmm.tar.gz
vog.lca.tsv.gz (Last common aencestors of groups): 561,634 bytes, MD5 checksum 6d2e0c950d1d8038adda324994fac6e0 https://fileshare.csb.univie.ac.at/vog/vog231/vog.lca.tsv.gz
vog.members.tsv.gz (Member protein ids of groups): 4,422,329 bytes, MD5 checksum 4db8bc0d55c2f996d57179a0c0f55ff7 https://fileshare.csb.univie.ac.at/vog/vog231/vog.members.tsv.gz
vog.raw_algs.alistat.txt (Statistics of multiple alignments): 3,633,840 bytes, MD5 checksum b994638ee8d53176011c1024fd97a441 https://fileshare.csb.univie.ac.at/vog/vog231/vog.raw_algs.alistat.txt
vog.raw_algs.tar.gz (Multiple sequence alignments of groups): 59,432,260 bytes, MD5 checksum d6a1a6a336cd4c4c9f1214e71973a12e https://fileshare.csb.univie.ac.at/vog/vog231/vog.raw_algs.tar.gz
vog.virusonly.tsv.gz (Specificity if groups to Viruses): 126,249 bytes, MD5 checksum 1b694b5226968840310e1ddcd1310dc0 https://fileshare.csb.univie.ac.at/vog/vog231/vog.virusonly.tsv.gz